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Enzyme activity assay kits explained: PDH, hexokinase, alpha-galactosidase and more

Most enzyme activity kits turn a reaction you cannot see into a colour change you can measure. Once you know the two or three ways they do it, choosing a kit and reading the result gets much easier.

Range: Biochemical and cell-based assays4 minute readUpdated

Pipette tip dispensing pink liquid into rows of small tubes
On this page
  1. Key points
  2. Activity is a rate, not an amount
  3. The three ways kits make activity visible
  4. Common kits and how they work
  5. Antioxidant capacity assays
  6. How to choose a kit
  7. Good practice for reliable rates
  8. Questions

Key points

  • Enzyme activity kits measure a rate: how fast a sample converts substrate under fixed conditions.
  • Most follow NADH or NADPH at 340 nm, a dye that changes colour, or a chromogenic substrate released by the enzyme.
  • Coupled assays link an invisible reaction to a measurable one with a helper enzyme, such as G6PDH for hexokinase or LDH for pyruvate kinase.
  • Run sample blanks, stay in the linear range, control temperature and normalise to protein.

Activity is a rate, not an amount

An ELISA tells you how much of an enzyme is present. An activity assay, often sold as an enzymatic assay kit, tells you how much work it is doing: substrate converted per minute under defined conditions. The two often disagree, because enzymes are switched on and off by phosphorylation, cofactors, inhibitors and damage. Measure both when the question is about function, pairing activity kits with ELISA kits for the same enzyme.

The three ways kits make activity visible

Following NADH or NADPH at 340 nm

Many dehydrogenases produce or consume NADH or NADPH, which absorb UV light at 340 nm while their oxidised forms do not. The absorbance change per minute gives the rate directly. You need a reader that measures at 340 nm and UV-transparent plates or quartz cuvettes.

Reducing a dye

The electrons from the reaction reduce a dye, often through an electron carrier. DCPIP loses its blue colour; tetrazolium salts such as WST, INT or MTT become coloured formazans. These readouts use visible light and standard plates.

A chromogenic substrate

The enzyme acts on a synthetic substrate that releases a coloured product. Many glycosidases are measured with p-nitrophenyl substrates, which release yellow p-nitrophenol, read at 400–405 nm once the reaction is stopped with alkali.

Common kits and how they work

Reaction and readout for common enzyme activity kits
EnzymeReaction measuredTypical readout
Succinate dehydrogenase (SDH)Succinate → fumarate; electrons reduce DCPIPDecrease at 600 nm
Pyruvate dehydrogenase (PDH)Pyruvate + CoA + NAD⁺ → acetyl-CoA + NADHNADH at 340 nm, or a coupled dye at about 450 nm
HexokinaseGlucose → glucose-6-phosphate, coupled to G6PDH making NADPHIncrease at 340 nm
Pyruvate kinasePEP → pyruvate, coupled to LDH consuming NADHDecrease at 340 nm
Alpha-galactosidase (α-gal)p-nitrophenyl-α-D-galactoside → p-nitrophenolIncrease at 405 nm after alkaline stop
Alanine aminotransferase (ALT, also SGPT: serum glutamic-pyruvic transaminase)Alanine + α-ketoglutarate → pyruvate, coupled to LDHDecrease at 340 nm
Thioredoxin reductaseNADPH reduces DTNB to yellow TNBIncrease at 412 nm, with an inhibitor control
LaccaseOxidation of ABTS to a green radicalIncrease at 420 nm

Antioxidant capacity assays

Radical scavenging assays measure how well a sample neutralises a stable coloured radical. They report total antioxidant capacity rather than the activity of one enzyme.

  • DPPH: the purple DPPH radical loses colour at 517 nm as antioxidants reduce it.
  • ABTS: the blue-green ABTS radical cation fades at 734 nm.
  • Hydroxyl radical scavenging: measures protection against hydroxyl radicals produced in the reaction.

Results are usually expressed as percent inhibition or as equivalents of a reference antioxidant such as Trolox.

How to choose a kit

  1. Sample type: tissue, cells, serum, plant material or soil, covered in the manual.
  2. Readout: 340 nm needs a UV-capable reader and plates; dye-based kits do not.
  3. Kinetic or endpoint: kinetic reads are more robust to sample colour and turbidity.
  4. Range: expected activity should fall within the kit’s linear range.
  5. Tests per kit: count samples, blanks, standards and replicates. Kits are often sold as 48 or 96 tests.

Good practice for reliable rates

  • Prepare samples on ice in a non-denaturing buffer and assay them promptly.
  • Pre-warm reagents to the assay temperature; a few degrees change the rate.
  • Run a sample blank without substrate to correct for colour and side reactions.
  • Dilute samples that react too fast; use only the linear part of the curve.
  • Normalise to total protein, tissue weight or cell number, as the question requires.

For a complete worked example, see the SDH activity assay guide. For cell-level readouts, see the cell viability guide, and for kits, the biochemical assay range.

Questions we get asked

What is an enzyme activity assay kit?

A ready-made set of buffer, substrate, cofactors and detection reagents that measures how fast an enzyme in your sample converts its substrate, usually by a change in absorbance per minute.

Why do so many enzyme kits read at 340 nm?

Because many enzymes are dehydrogenases or can be coupled to one, and the cofactors NADH and NADPH absorb strongly at 340 nm while their oxidised forms do not. The absorbance change follows the reaction directly.

What is a coupled enzyme assay?

An assay where the product of your enzyme's reaction is used by a second, helper enzyme in excess, whose reaction is easy to measure. Hexokinase, for example, is measured by coupling its product to glucose-6-phosphate dehydrogenase, which makes NADPH.

Endpoint or kinetic measurement?

Kinetic measurement, taking several readings over time, gives the rate directly and is less affected by sample colour and turbidity. Endpoint reads are simpler and suit kits whose reaction is stopped, such as p-nitrophenol assays.

Sources

  1. Assessment of mitochondrial respiratory chain enzymatic activities on tissues and cultured cells. Spinazzi M et al. Nat Protoc. 2012;7:1235-46.
  2. Antioxidant activity applying an improved ABTS radical cation decolorization assay. Re R et al. Free Radic Biol Med. 1999;26:1231-7.
  3. Use of a free radical method to evaluate antioxidant activity. Brand-Williams W et al. LWT - Food Science and Technology. 1995;28:25-30.

For research use only. Protocols here are general outlines: follow your kit manual and your institution’s safety rules. See our editorial policy.

Products for this workflow

Biochemical and cell-based assays

Enzyme activity and metabolite assay kits, and cell function products for viability, proliferation, apoptosis and cell cycle experiments.

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